sig
type encoding =
Matrix
| HTML_Graph
| Js_Graph
| HTML
| HTML_Tabular
| DOT
| TXT
| TXT_Tabular
| XLS
| Octave
| Matlab
| Maple
| Mathematica
| SBML
| DOTNET
| Json
module type FormatMap =
sig
type 'a t
val add :
Loggers.encoding ->
'a -> 'a Loggers.FormatMap.t -> 'a Loggers.FormatMap.t
val find : Loggers.encoding -> 'a Loggers.FormatMap.t -> 'a
val empty : 'a Loggers.FormatMap.t
end
module FormatMap : FormatMap
type t
val refresh_id : Loggers.t -> unit
val get_encoding_format : Loggers.t -> Loggers.encoding
val fprintf :
Loggers.t -> ('a, Format.formatter, unit) Pervasives.format -> 'a
val print_newline : Loggers.t -> unit
val print_cell : Loggers.t -> string -> unit
val print_as_logger : Loggers.t -> (Format.formatter -> unit) -> unit
val flush_logger : Loggers.t -> unit
val close_logger : Loggers.t -> unit
val open_infinite_buffer : ?mode:Loggers.encoding -> unit -> Loggers.t
val open_circular_buffer :
?mode:Loggers.encoding -> ?size:int -> unit -> Loggers.t
val open_logger_from_formatter :
?mode:Loggers.encoding -> Format.formatter -> Loggers.t
val open_logger_from_channel :
?mode:Loggers.encoding -> Pervasives.out_channel -> Loggers.t
val open_row : Loggers.t -> unit
val close_row : Loggers.t -> unit
val print_breakable_space : Loggers.t -> unit
val print_breakable_hint : Loggers.t -> unit
val dummy_txt_logger : Loggers.t
val dummy_html_logger : Loggers.t
val redirect : Loggers.t -> Format.formatter -> Loggers.t
val formatter_of_logger : Loggers.t -> Format.formatter option
val channel_of_logger : Loggers.t -> Pervasives.out_channel option
val flush_buffer : Loggers.t -> Format.formatter -> unit
val flush_and_clean : Loggers.t -> Format.formatter -> unit
val int_of_string_id : Loggers.t -> string -> int
val graph_of_logger : Loggers.t -> Graph_loggers_sig.graph
val add_node :
Loggers.t -> string -> Graph_loggers_sig.options list -> unit
val add_edge :
Loggers.t -> string -> string -> Graph_loggers_sig.options list -> unit
val dump_json : Loggers.t -> Yojson.Basic.json -> unit
val get_edge_map :
Loggers.t -> Graph_loggers_sig.options list list Mods.String2Map.t
val get_nodes : Loggers.t -> (string * Graph_loggers_sig.options list) list
val get_expr :
Loggers.t ->
Ode_loggers_sig.variable ->
(Ode_loggers_sig.ode_var_id, Ode_loggers_sig.ode_var_id) Alg_expr.e
Locality.annot option
val set_expr :
Loggers.t ->
Ode_loggers_sig.variable ->
(Ode_loggers_sig.ode_var_id, Ode_loggers_sig.ode_var_id) Alg_expr.e
Locality.annot -> unit
val is_const : Loggers.t -> Ode_loggers_sig.variable -> bool
val of_json : Yojson.Basic.json -> string list
val to_json : Loggers.t -> Yojson.Basic.json
val get_fresh_obs_id : Loggers.t -> int
val get_fresh_reaction_id : Loggers.t -> int
val get_fresh_meta_id : Loggers.t -> int
val set_id_of_global_parameter :
Loggers.t -> Ode_loggers_sig.variable -> string -> unit
val get_id_of_global_parameter :
Loggers.t -> Ode_loggers_sig.variable -> string
val is_dangerous_ode_variable :
Loggers.t -> Ode_loggers_sig.variable -> bool
val flag_dangerous :
Loggers.t -> Ode_loggers_sig.variable -> string -> unit
val has_forbidden_char : Loggers.t -> string -> bool
val allocate_fresh_name : Loggers.t -> string -> string -> string
val allocate : Loggers.t -> string -> unit
val print_binding_type :
Loggers.t ->
?binding_type_symbol:string ->
agent_name:string -> site_name:string -> unit
end